Gender-based violence (GBV) affects individuals of all genders, yet research has focused predominantly on female victims, leaving male victims under-represented. In African universities, societal norms surrounding masculinity amplify the underreporting of GBV against men, creating significant obstacles to recognition and support. This study explores the prevalence and patterns of GBV experienced by men in academic environments, with an emphasis on how demographic and institutional factors influence their willingness to report such experiences. A mixed-methods approach was employed, combining quantitative and qualitative data collected through online questionnaires. The results reveal a notable prevalence of GBV against men, with physical and psychological violence being the most frequently reported forms. The findings underscore the pervasive yet under-acknowledged nature of GBV against men in African universities and highlight the need for gender-sensitive policies and institutional interventions. Recommendations include establishing confidential reporting systems and inclusive communication policies to foster a supportive environment for all victims. This article is published in the thematic collection ‘Decolonising Gender Knowledge in Sub-Saharan Africa: Empirical Insights and Theoretical Innovations from Early Career Researchers’, edited by Alicia Bowman, Evelyn Garwe and Juliet Thondhlana.